STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_29880N-formylglutamate amidohydrolase. (291 aa)    
Predicted Functional Partners:
OSB_05860
Enamidase.
  
  
 0.713
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
       0.627
OSB_09020
8-oxoguanine deaminase.
  
 
 0.597
OSB_27360
Hypothetical protein.
  
     0.580
OSB_31660
Hypothetical protein.
  
     0.483
OSB_09450
Ski2-like helicase.
  
     0.482
OSB_07700
Hypothetical protein.
 
     0.467
OSB_06230
ChaC-like protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
 
     0.460
OSB_27350
Hypothetical protein; Aerotolerance regulator N-terminal.
  
     0.424
OSB_27340
Hypothetical protein.
  
     0.421
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.