STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgC_5Acyl-CoA dehydrogenase. (387 aa)    
Predicted Functional Partners:
fadJ
Fatty acid oxidation complex subunit alpha.
 
 0.985
caiD
Carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.984
OSB_31130
Hypothetical protein.
 
 
  0.968
fadA_1
Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.946
fadA_2
Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.946
phbA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.946
etfA_1
Electron transfer flavoprotein subunit alpha.
 
 0.943
mmgC_2
Acyl-CoA dehydrogenase.
  
  
 
0.921
acdA
Acyl-CoA dehydrogenase.
  
  
 
0.920
mmgC_4
Acyl-CoA dehydrogenase.
  
  
 
0.913
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.