STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG58_02130XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
BG58_08915
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.990
BG58_02135
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
BG58_03045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
BG58_40110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.977
BG58_15820
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
BG58_27470
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.974
BG58_40095
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.965
BG58_01105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.964
BG58_33320
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.963
BG58_35310
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.961
Your Current Organism:
Caballeronia jiangsuensis
NCBI taxonomy Id: 1458357
Other names: Burkholderia jiangsuensis, Burkholderia jiangsuensis Liu et al. 2014, Burkholderia sp. MP-1, C. jiangsuensis, Caballeronia jiangsuensis (Liu et al. 2014) Dobritsa and Samadpour 2016, LMG 27927, LMG:27927, MCCC 1K00250, strain MP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.