STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG58_36350MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
BG58_12270
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.788
BG58_11415
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.711
BG58_16735
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.647
BG58_04760
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
BG58_13605
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.514
BG58_36345
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.503
BG58_39575
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.502
BG58_01685
Chloride transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.498
BG58_04490
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.434
BG58_05465
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.434
Your Current Organism:
Caballeronia jiangsuensis
NCBI taxonomy Id: 1458357
Other names: Burkholderia jiangsuensis, Burkholderia jiangsuensis Liu et al. 2014, Burkholderia sp. MP-1, C. jiangsuensis, Caballeronia jiangsuensis (Liu et al. 2014) Dobritsa and Samadpour 2016, LMG 27927, LMG:27927, MCCC 1K00250, strain MP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.