STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRAA_0986Predicted thioesterase; Identified by MetaGeneAnnotator; putative. (149 aa)    
Predicted Functional Partners:
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
       0.773
SRAA_0988
Lactate dehydrogenase and related dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
   0.674
SRAA_1901
3-hydroxyacyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative.
  
 
 0.598
SRAA_0987
Nitroreductase; Identified by MetaGeneAnnotator; putative.
       0.573
SRAA_1722
S-malonyltransferase; Identified by MetaGeneAnnotator; putative.
  
 
 0.466
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.