STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCB_0056Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative. (1142 aa)    
Predicted Functional Partners:
SMCB_0058
Hypothetical protein; Identified by MetaGeneAnnotator; putative.
 
   0.994
SMCB_0057
Hypothetical protein; Identified by MetaGeneAnnotator; putative.
 
 
   0.975
SMCB_0055
Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative.
 
     0.961
SMCB_0060
Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.419
SMCB_0059
Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative.
       0.411
Your Current Organism:
Serpentinomonas mccroryi
NCBI taxonomy Id: 1458426
Other names: Comamonadaceae bacterium B1, S. mccroryi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.