STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCB_1439Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative. (336 aa)    
Predicted Functional Partners:
SMCB_0924
Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative.
 
  
 0.849
SMCB_0158
Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative.
 
  
 0.848
SMCB_0850
Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative.
 
  
 0.846
SMCB_1919
Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative.
 
  
 0.845
SMCB_0925
Hypothetical protein; Identified by MetaGeneAnnotator; putative.
 
  
 0.720
SMCB_1440
Disulfide bond chaperones of the HSP33 family; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
       0.590
SMCB_1441
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily; Identified by MetaGeneAnnotator; putative.
       0.590
SMCB_0849
Hypothetical protein; Identified by MetaGeneAnnotator; putative.
 
  
 0.534
tctC-2
Uncharacterized protein conserved in bacteria; Identified by MetaGeneAnnotator; putative.
 
    
0.487
xerD
Site-specific recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.427
Your Current Organism:
Serpentinomonas mccroryi
NCBI taxonomy Id: 1458426
Other names: Comamonadaceae bacterium B1, S. mccroryi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.