STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO59308.1UDP-glucose 4-epimerase. (334 aa)    
Predicted Functional Partners:
CDO59310.1
ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
 
  0.954
CDO59313.1
dTDP-glucose 4,6-dehydratase.
 
  
  0.913
CDO59311.1
Oxidoreductase, Gfo/Idh/MocA family.
 
 
  0.896
CDO59314.1
UDP-galactopyranose mutase.
 
 
  0.881
CDO59309.1
UDP-glucose 4-epimerase.
 
  
 
0.876
CDO59346.1
FIG01163484: hypothetical protein.
  
  0.836
CDO59312.1
UDP-glucose/GDP-mannose dehydrogenase family protein.
 
 0.829
CDO59303.1
Methyltransferase type 11.
 
     0.826
CDO59345.1
dTDP-glucose 4,6-dehydratase.
  
  
  0.803
CDO59030.1
Glutamate synthase [NADPH] large chain.
    
  0.794
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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