STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO59421.1ABC-type multidrug transport system, ATPase component. (314 aa)    
Predicted Functional Partners:
CDO59420.1
ABC-type multidrug transport system, permease component.
 
  0.996
CDO59422.1
Putative efflux pump membrane fusion protein.
  
 0.962
CDO59547.1
Gliding motility protein GldF.
  
 0.923
CDO59423.1
Transcriptional regulator, TetR family.
 
     0.807
cysC
Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
     
 0.796
CDO60326.1
ABC transporter, ATP-binding protein.
  
 0.709
CDO59412.1
ABC-type multidrug transport system, permease component.
 
 
  0.667
CDO59227.1
ABC transporter ATPase and permease component.
   
0.652
CDO58929.1
ABC transporter, permease/ATP-binding protein.
   
0.652
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.580
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.