STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO59548.1ABC transporter, ATP-binding protein. (350 aa)    
Predicted Functional Partners:
CDO59547.1
Gliding motility protein GldF.
 
 0.996
CDO59546.1
Gliding motility protein GldG.
 
   
 0.950
CDO59545.1
Hypothetical protein.
 
     0.947
CDO59420.1
ABC-type multidrug transport system, permease component.
 
 
  0.942
CDO61220.1
Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.836
cysC
Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
  
 0.822
CDO60992.1
Lipoprotein releasing system ATP-binding protein LolD.
 
  
0.682
CDO60326.1
ABC transporter, ATP-binding protein.
 
0.673
CDO59227.1
ABC transporter ATPase and permease component.
 
0.672
CDO59039.1
ABC transporter, ATP-binding protein.
 
   
 0.670
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.