STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO59585.1GCN5-related N-acetyltransferase. (214 aa)    
Predicted Functional Partners:
CDO59586.1
Saccharopine dehydrogenase.
 
  
  0.812
CDO61144.1
Hypothetical protein.
  
     0.734
CDO59587.1
Oxidoreductase, zinc-binding dehydrogenase family.
 
    0.731
CDO58448.1
BarH.
  
     0.610
CDO59584.1
Transcriptional regulator, TetR family.
       0.548
CDO59689.1
Beta-carotene hydroxylase.
  
     0.463
CDO60553.1
Sphingosine-1-phosphate lyase (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase).
  
  
  0.445
CDO58595.1
Putative secreted protein.
  
     0.413
CDO59639.1
Transcriptional regulator, TetR family.
  
     0.408
nadE
NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
  
  0.400
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.