STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO59692.1Alpha-L-fucosidase|GH29. (490 aa)    
Predicted Functional Partners:
CDO58306.1
Sulfatase, family S1 subfamily 8.
  
     0.641
CDO60000.1
Sulfatase, family S1 subfamily 32.
  
     0.617
CDO61168.1
Oxidoreductase, aldo/keto reductase family.
  
     0.593
CDO58587.1
Sulfatase, family S1 subfamily 64.
  
     0.550
CDO59691.1
Truncated hemoglobins.
       0.539
CDO58893.1
Sulfatase, family S1 subfamily 68.
 
     0.536
CDO61108.1
Sulfatase, family S1 subfamily 41.
  
     0.506
CDO58883.1
Cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein.
  
     0.482
CDO58875.1
Arylsulfatase, family S1 subfamily 4.
  
     0.474
CDO59706.1
Arylsulfatase, family S1 subfamily 4.
  
     0.417
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.