STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO59728.1Uncharacterized protein, similar to the N-terminal domain of Lon protease. (223 aa)    
Predicted Functional Partners:
CDO59886.2
Molybdopterin biosynthesis protein MoeB.
    
 0.864
CDO59727.1
FIG000875: Thioredoxin domain-containing protein EC-YbbN.
 
   
 0.757
CDO59729.1
FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster; Belongs to the UPF0434 family.
       0.740
CDO59730.1
FIG028220: hypothetical protein co-occurring with HEAT repeat protein.
       0.709
CDO60161.1
mRNA 3-end processing factor.
     
 0.651
CDO58828.1
Metallo-beta-lactamase family protein,RNA-specific.
     
 0.651
CDO58228.1
Ankyrin.
    
 0.533
CDO59731.1
HIT family hydrolase.
       0.454
CDO60888.1
DNA polymerase III chi subunit.
  
     0.411
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
Server load: low (22%) [HD]