STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO59756.1Porin 41 (Por41) precursor. (414 aa)    
Predicted Functional Partners:
CDO58699.1
VacJ-like lipoprotein.
  
 
 
 0.940
CDO58836.1
Outer surface protein, putative.
   
 
 0.927
tolB
Protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.881
CDO59757.1
FIG00720420: hypothetical protein.
 
   
 0.783
CDO60894.1
Hypothetical protein.
  
     0.770
CDO58924.1
Translation initiation factor 2.
  
 
 0.770
CDO60380.1
Hypothetical protein.
  
     0.761
CDO60120.1
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.752
CDO59049.1
Toluene tolerance protein, Ttg2 family.
  
 
   0.735
CDO59752.1
Hypothetical protein.
  
     0.725
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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