STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO58389.1FAD-binding monooxygenase, PheA/TfdB family,similarity to 2,4-dichlorophenol 6-monooxygenase. (593 aa)    
Predicted Functional Partners:
CDO60791.1
NADH dehydrogenase.
  
  0.775
CDO59701.1
Probable iron-sulfur binding protein YPO1417.
    
 0.671
CDO60195.1
Salicylate hydroxylase.
  
   
 0.620
CDO59920.1
FIG00433945: hypothetical protein.
  
  
  0.617
CDO60247.1
Predicted acyl esterase/dipeptidyl-peptidase.
  
     0.614
CDO58493.1
Rieske 2Fe-2S domain protein.
  
 
 0.597
CDO58387.1
Glutathione S-transferase, unnamed subgroup.
       0.590
CDO58388.1
Transcriptional regulator, TetR family.
       0.590
CDO61157.1
Hydroxymethylglutaryl-CoA synthase.
   
 
 0.577
CDO60598.1
Cyclohexanone monooxygenase.
  
 
  0.511
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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