STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO60046.1Alpha-ketoglutarate-dependent taurine dioxygenase. (288 aa)    
Predicted Functional Partners:
CDO60238.1
Alkanesulfonate monooxygenase.
  
 
  0.711
CDO60047.1
Uncharacterized protein conserved in bacteria.
       0.682
CDO61088.1
Glutamate synthase [NADPH] large chain.
  
 
  0.663
CDO58585.1
Alpha-ketoglutarate-dependent taurine dioxygenase.
  
  
 
0.633
CDO59992.1
Putative NADPH-dependent FMN reductase.
   
 
  0.547
CDO60048.1
Cyclohexanone monooxygenase.
    
  0.517
CDO60045.1
Ornithine cyclodeaminase.
  
    0.431
CDO60672.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components.
  
 
  0.431
CDO60044.1
Permeases of the major facilitator superfamily.
       0.423
CDO60670.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 
  0.414
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.