STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO60140.1Monooxygenase, flavin-binding family. (469 aa)    
Predicted Functional Partners:
CDO60141.1
Enoyl-CoA hydratase.
   
   0.677
CDO58617.1
2,4-dienoyl-CoA reductase [NADPH].
     
 0.635
CDO60139.1
Transcriptional regulator, TetR family.
 
     0.587
CDO60138.2
Carbohydrate esterase|CE10.
  
 
  0.507
CDO60137.1
Quinone oxidoreductase.
 
     0.445
CDO58703.1
Hypothetical protein.
 
  
   0.445
CDO60142.1
Thioesterase family protein domain protein.
       0.423
CDO60143.1
Thioesterase family protein domain protein.
       0.423
CDO60598.1
Cyclohexanone monooxygenase.
  
  
  0.417
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.