STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO60652.1Sensory transduction histidine kinase. (554 aa)    
Predicted Functional Partners:
CDO60967.1
Multi-sensor hybrid histidine kinase.
 
0.997
CDO59825.1
Sensory box histidine kinase/response regulator.
 
0.996
CDO59868.1
Phytochrome, two-component sensor histidine kinase.
 
 0.996
CDO60741.1
Sensor histidine kinase.
 
0.996
CDO58495.1
Sensory box histidine kinase/response regulator.
0.995
CDO58861.1
Signal transduction histidine kinase CheA.
  
 0.995
CDO61436.1
Pole remodelling regulatory diguanylate cyclase.
 0.994
CDO61437.1
Chemotaxis protein CheV.
 0.994
CDO61055.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.983
CDO60601.1
Two-component hybrid sensor and regulator.
 
0.982
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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