STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO60730.1Phosphoglucosamine mutase / Phosphomannomutase. (499 aa)    
Predicted Functional Partners:
CDO59050.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|GT4; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.967
CDO59047.1
UTP--glucose-1-phosphate uridylyltransferase.
   
 0.960
CDO60383.1
Glucose-6-phosphate isomerase.
  
 
 0.812
CDO59330.1
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.802
CDO59735.1
Quino(hemo)protein alcohol dehydrogenase,PQQ-dependent.
     
 0.787
CDO58917.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.774
CDO60729.1
Miscellaneous; hypothetical/partial homology.
       0.773
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.767
CDO60072.1
PTS system permease (IIAMan), nitrogen regulatory IIA protein.
    
  0.736
CDO60060.1
Nucleotidyl transferase possibly involved in threonylcarbamoyladenosine formation.
 
 
 0.727
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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