STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO60827.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
CDO60829.1
Hypothetical protein.
       0.799
CDO60835.1
Hypothetical protein.
       0.799
CDO60840.1
Prophage MuSo1, DNA transposition protein,putative.
       0.793
CDO60838.1
Hypothetical protein.
       0.787
CDO60830.1
Hypothetical protein.
       0.779
CDO60834.1
Hypothetical protein.
       0.774
CDO60828.1
Hypothetical protein.
       0.773
CDO60831.1
Hypothetical protein.
       0.773
CDO60832.1
Hypothetical protein.
       0.773
CDO60833.1
Hypothetical protein.
       0.773
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.