Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CDO58665.1 | CDO60864.1 | BN1012_Phect451 | BN1012_Phect2651 | ATP-dependent DNA helicase UvrD/PcrA. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.684 |
| CDO58665.1 | radA | BN1012_Phect451 | BN1012_Phect2647 | ATP-dependent DNA helicase UvrD/PcrA. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.764 |
| CDO58665.1 | recA | BN1012_Phect451 | BN1012_Phect277 | ATP-dependent DNA helicase UvrD/PcrA. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.962 |
| CDO60162.1 | radA | BN1012_Phect1949 | BN1012_Phect2647 | FIG003033: Helicase domain protein. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.602 |
| CDO60162.1 | recA | BN1012_Phect1949 | BN1012_Phect277 | FIG003033: Helicase domain protein. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.432 |
| CDO60859.1 | CDO60861.1 | BN1012_Phect2646 | BN1012_Phect2648 | Colicin V production protein. | ATP-binding cassette transporter nucleotide-binding domain. | 0.632 |
| CDO60859.1 | CDO60862.1 | BN1012_Phect2646 | BN1012_Phect2649 | Colicin V production protein. | Probable ABC transporter permease protein. | 0.568 |
| CDO60859.1 | CDO60863.1 | BN1012_Phect2646 | BN1012_Phect2650 | Colicin V production protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.557 |
| CDO60859.1 | CDO60864.1 | BN1012_Phect2646 | BN1012_Phect2651 | Colicin V production protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.505 |
| CDO60859.1 | purF | BN1012_Phect2646 | BN1012_Phect2645 | Colicin V production protein. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.962 |
| CDO60859.1 | radA | BN1012_Phect2646 | BN1012_Phect2647 | Colicin V production protein. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.697 |
| CDO60861.1 | CDO60859.1 | BN1012_Phect2648 | BN1012_Phect2646 | ATP-binding cassette transporter nucleotide-binding domain. | Colicin V production protein. | 0.632 |
| CDO60861.1 | CDO60862.1 | BN1012_Phect2648 | BN1012_Phect2649 | ATP-binding cassette transporter nucleotide-binding domain. | Probable ABC transporter permease protein. | 0.999 |
| CDO60861.1 | CDO60863.1 | BN1012_Phect2648 | BN1012_Phect2650 | ATP-binding cassette transporter nucleotide-binding domain. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.602 |
| CDO60861.1 | CDO60864.1 | BN1012_Phect2648 | BN1012_Phect2651 | ATP-binding cassette transporter nucleotide-binding domain. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.534 |
| CDO60861.1 | purF | BN1012_Phect2648 | BN1012_Phect2645 | ATP-binding cassette transporter nucleotide-binding domain. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.516 |
| CDO60861.1 | radA | BN1012_Phect2648 | BN1012_Phect2647 | ATP-binding cassette transporter nucleotide-binding domain. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.757 |
| CDO60862.1 | CDO60859.1 | BN1012_Phect2649 | BN1012_Phect2646 | Probable ABC transporter permease protein. | Colicin V production protein. | 0.568 |
| CDO60862.1 | CDO60861.1 | BN1012_Phect2649 | BN1012_Phect2648 | Probable ABC transporter permease protein. | ATP-binding cassette transporter nucleotide-binding domain. | 0.999 |
| CDO60862.1 | CDO60863.1 | BN1012_Phect2649 | BN1012_Phect2650 | Probable ABC transporter permease protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.679 |
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