STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO61084.1Hypothetical metal-binding enzyme, YcbL homolog. (218 aa)    
Predicted Functional Partners:
CDO61083.1
3-oxoacyl-[acyl-carrier protein] reductase.
    
  0.790
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
 
0.755
CDO61295.1
Lactoylglutathione lyase.
     
 0.742
CDO61082.1
Hypothetical protein.
       0.701
CDO61085.1
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.693
CDO59279.1
Putative exported protein.
 
    0.585
CDO60548.1
Metallo-beta-lactamase family protein.
  
  
  0.577
CDO59680.1
Rhodanese-related sulfurtransferases.
  
  0.514
CDO61080.1
Nucleoside triphosphate pyrophosphohydrolase MazG.
       0.484
CDO61081.1
MFS/sugar transport family protein.
       0.484
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.