STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO61169.1BarH. (375 aa)    
Predicted Functional Partners:
CDO59701.1
Probable iron-sulfur binding protein YPO1417.
    
  0.765
CDO61144.1
Hypothetical protein.
  
     0.714
CDO60598.1
Cyclohexanone monooxygenase.
  
    0.703
CDO60194.1
Glyoxalase family protein.
  
  
  0.625
CDO58595.1
Putative secreted protein.
  
     0.590
CDO59365.1
N-acyl-D-aspartate/D-glutamate deacylase.
  
     0.584
CDO60193.1
Lysophospholipase; Monoglyceride lipase; putative.
  
     0.584
CDO58758.1
Alkylhydroperoxidase AhpD core domain.
  
     0.583
CDO59220.1
Limonene 1,2-monooxygenase.
  
     0.569
CDO58590.1
FIG00994467: hypothetical protein.
  
     0.560
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.