STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO61326.1Polysaccharide biosynthesis related protein. (469 aa)    
Predicted Functional Partners:
CDO61325.1
Hypothetical protein.
 
    0.936
CDO59077.1
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
  
  
 0.906
CDO61327.1
Hypothetical protein.
    0.885
CDO59347.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.853
CDO61323.1
Mll8447 protein.
 
    0.846
CDO59314.1
UDP-galactopyranose mutase.
  
  
 0.839
CDO61332.1
Permeases of the major facilitator superfamily.
 
  
 0.824
CDO61322.1
Carbohydrate esterase|CE4.
 
     0.821
CDO61329.1
Putative Polysaccharide biosynthesis, transport protein.
 
  
 0.789
CDO61331.1
Glycosyl transferase|GT4.
 
 
  0.763
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.