STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO61406.1Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (205 aa)    
Predicted Functional Partners:
CDO58410.1
Carbonic anhydrase, family 3.
    
 0.967
CDO60327.1
Formate/nitrite transporter.
  
    0.859
CDO59117.1
Sulfate transporter.
 
 
 0.767
CDO61405.1
Hypothetical protein.
       0.680
CDO61407.1
Exoenzymes regulatory protein AepA precursor.
       0.547
cysC
Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
  
 0.476
CDO61404.1
Hypothetical protein.
       0.444
CDO59827.1
NADP-dependent malic enzyme.
     
 0.442
CDO59050.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|GT4; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.422
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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