STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO58987.1ABC-type multidrug transport system. (593 aa)    
Predicted Functional Partners:
CDO58985.1
HlyD family secretion protein.
 0.997
CDO59227.1
ABC transporter ATPase and permease component.
 
 
 
0.902
pstB
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.897
CDO60326.1
ABC transporter, ATP-binding protein.
 
 
 
0.894
CDO58929.1
ABC transporter, permease/ATP-binding protein.
 
 
 
0.892
CDO61262.1
General L-amino acid transport ATP-binding protein.
 
     
0.842
CDO58986.1
Toxin secretion ATP-binding protein.
 
    
0.823
CDO61241.1
Type I secretion outer membrane protein, TolC precursor.
 
 
 0.809
CDO60122.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.706
CDO58988.1
DNA gyrase subunit A.
 
  
 0.664
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.