Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL17201.1 | SCL38513.1 | GA0074692_0113 | GA0074692_5038 | Cell wall-associated hydrolase, NlpC family. | NlpC/P60 family protein. | 0.754 |
SCL17201.1 | SCL38516.1 | GA0074692_0113 | GA0074692_5039 | Cell wall-associated hydrolase, NlpC family. | Cell wall-associated hydrolase, NlpC family. | 0.464 |
SCL17201.1 | SCL41616.1 | GA0074692_0113 | GA0074692_6409 | Cell wall-associated hydrolase, NlpC family. | Cell wall-associated hydrolase, NlpC family. | 0.463 |
SCL38513.1 | SCL17201.1 | GA0074692_5038 | GA0074692_0113 | NlpC/P60 family protein. | Cell wall-associated hydrolase, NlpC family. | 0.754 |
SCL38513.1 | SCL38516.1 | GA0074692_5038 | GA0074692_5039 | NlpC/P60 family protein. | Cell wall-associated hydrolase, NlpC family. | 0.455 |
SCL38513.1 | SCL41616.1 | GA0074692_5038 | GA0074692_6409 | NlpC/P60 family protein. | Cell wall-associated hydrolase, NlpC family. | 0.467 |
SCL38516.1 | SCL17201.1 | GA0074692_5039 | GA0074692_0113 | Cell wall-associated hydrolase, NlpC family. | Cell wall-associated hydrolase, NlpC family. | 0.464 |
SCL38516.1 | SCL38513.1 | GA0074692_5039 | GA0074692_5038 | Cell wall-associated hydrolase, NlpC family. | NlpC/P60 family protein. | 0.455 |
SCL38516.1 | SCL41616.1 | GA0074692_5039 | GA0074692_6409 | Cell wall-associated hydrolase, NlpC family. | Cell wall-associated hydrolase, NlpC family. | 0.492 |
SCL41616.1 | SCL17201.1 | GA0074692_6409 | GA0074692_0113 | Cell wall-associated hydrolase, NlpC family. | Cell wall-associated hydrolase, NlpC family. | 0.463 |
SCL41616.1 | SCL38513.1 | GA0074692_6409 | GA0074692_5038 | Cell wall-associated hydrolase, NlpC family. | NlpC/P60 family protein. | 0.467 |
SCL41616.1 | SCL38516.1 | GA0074692_6409 | GA0074692_5039 | Cell wall-associated hydrolase, NlpC family. | Cell wall-associated hydrolase, NlpC family. | 0.492 |