STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL18120.1Trehalose 6-phosphate synthase. (471 aa)    
Predicted Functional Partners:
SCL35950.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 
 0.996
SCL41734.1
Trehalose-phosphatase.
 
 0.982
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.920
SCL36525.1
UDP-glucose pyrophosphorylase.
    
 0.919
SCL31258.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.881
SCL29088.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.878
SCL41736.1
Trehalose 6-phosphate synthase.
  
  
 
0.870
SCL19731.1
(1->4)-alpha-D-glucan synthase (UDP-glucose).
     
 0.745
SCL22034.1
(1->4)-alpha-D-glucan synthase (UDP-glucose).
     
 0.745
SCL22048.1
Maltooligosyltrehalose trehalohydrolase.
    
 0.618
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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