STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL19551.1Membrane carboxypeptidase (penicillin-binding protein). (777 aa)    
Predicted Functional Partners:
SCL41005.1
Protein of unknown function.
   
 
 0.928
SCL38550.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
  
 
 0.836
SCL18443.1
Peptidoglycan synthetase FtsI.
  
 
 0.822
SCL18496.1
DivIVA domain-containing protein.
 
 
 
 0.818
SCL19548.1
Hypothetical protein.
       0.775
SCL24142.1
DivIVA domain-containing protein.
   
 
 0.765
SCL36762.1
DivIVA domain-containing protein.
   
 
 0.765
mltG
UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.753
SCL41533.1
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.720
SCL18461.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
  
 
 
 0.710
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.