STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL23820.1Pyruvate dehydrogenase E1 component beta subunit. (322 aa)    
Predicted Functional Partners:
SCL23815.1
Pyruvate dehydrogenase E1 component alpha subunit.
 0.999
SCL24271.1
Pyruvate dehydrogenase E1 component alpha subunit.
 0.998
SCL38396.1
Pyruvate dehydrogenase E1 component alpha subunit.
 0.997
SCL38402.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.996
SCL24282.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.995
SCL17843.1
2-oxoglutarate dehydrogenase E2 component.
 
 0.994
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.991
SCL17486.1
2-oxoisovalerate dehydrogenase E1 component.
 
0.985
SCL29401.1
Hypothetical protein.
  
 0.979
SCL36119.1
Dihydrolipoamide dehydrogenase.
 
 0.975
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.