STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL24551.1Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. (66 aa)    
Predicted Functional Partners:
SCL37190.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
     0.751
SCL31080.1
Hypothetical protein.
   
    0.597
SCL17248.1
Osmotically-inducible protein OsmY, contains BON domain.
  
    0.568
SCL23799.1
BON domain-containing protein.
  
    0.568
SCL41314.1
Osmotically-inducible protein OsmY, contains BON domain.
  
    0.568
SCL37184.1
Pyridoxamine 5'-phosphate oxidase.
 
    0.557
SCL34804.1
Hypothetical protein.
   
    0.554
SCL32457.1
Sulfofructosephosphate aldolase.
   
    0.535
SCL24547.1
Probable phosphoglycerate mutase.
       0.518
SCL17232.1
Butirosin biosynthesis protein H, N-terminal.
  
    0.506
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.