STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL25513.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (469 aa)    
Predicted Functional Partners:
SCL25523.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.987
SCL25518.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.983
SCL40186.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.894
SCL19792.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.890
SCL37278.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.890
SCL25500.1
Sugar phosphate isomerase/epimerase.
 
    0.838
SCL25505.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
     0.838
SCL25495.1
Hypothetical protein.
 
    0.827
SCL28812.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.804
SCL25528.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.797
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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