STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL27510.1Hypothetical protein. (408 aa)    
Predicted Functional Partners:
SCL27061.1
Glycoside-hydrolase family GH114.
  
     0.739
SCL19182.1
Putative Ig domain-containing protein.
  
     0.723
SCL32310.1
Cupin domain-containing protein.
  
     0.641
SCL29047.1
Hypothetical protein.
  
     0.628
SCL27102.1
Hypothetical protein.
  
     0.612
SCL27505.1
Predicted arabinose efflux permease, MFS family.
       0.565
SCL28801.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.518
SCL26070.1
6-O-methylguanine DNA methyltransferase, DNA binding domain.
  
     0.479
SCL27515.1
Transcriptional regulator PadR-like family protein.
       0.461
SCL27521.1
Hypothetical protein.
       0.461
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.