Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL19169.1 | SCL28651.1 | GA0074692_0562 | GA0074692_2580 | Nitrogen fixation protein NifU. | PLD-like domain-containing protein. | 0.866 |
SCL19169.1 | SCL28654.1 | GA0074692_0562 | GA0074692_2581 | Nitrogen fixation protein NifU. | Protein of unknown function. | 0.866 |
SCL20603.1 | SCL20606.1 | GA0074692_0916 | GA0074692_0917 | Helicase conserved C-terminal domain-containing protein. | Methyltransferase domain-containing protein. | 0.951 |
SCL20603.1 | SCL20609.1 | GA0074692_0916 | GA0074692_0918 | Helicase conserved C-terminal domain-containing protein. | Helicase conserved C-terminal domain-containing protein; Manually curated. | 0.982 |
SCL20603.1 | SCL28651.1 | GA0074692_0916 | GA0074692_2580 | Helicase conserved C-terminal domain-containing protein. | PLD-like domain-containing protein. | 0.776 |
SCL20603.1 | SCL28654.1 | GA0074692_0916 | GA0074692_2581 | Helicase conserved C-terminal domain-containing protein. | Protein of unknown function. | 0.792 |
SCL20603.1 | SCL28670.1 | GA0074692_0916 | GA0074692_2584 | Helicase conserved C-terminal domain-containing protein. | Methyltransferase domain-containing protein. | 0.792 |
SCL20603.1 | SCL28676.1 | GA0074692_0916 | GA0074692_2585 | Helicase conserved C-terminal domain-containing protein. | SNF2 family N-terminal domain-containing protein. | 0.936 |
SCL20606.1 | SCL20603.1 | GA0074692_0917 | GA0074692_0916 | Methyltransferase domain-containing protein. | Helicase conserved C-terminal domain-containing protein. | 0.951 |
SCL20606.1 | SCL20609.1 | GA0074692_0917 | GA0074692_0918 | Methyltransferase domain-containing protein. | Helicase conserved C-terminal domain-containing protein; Manually curated. | 0.950 |
SCL20606.1 | SCL28651.1 | GA0074692_0917 | GA0074692_2580 | Methyltransferase domain-containing protein. | PLD-like domain-containing protein. | 0.781 |
SCL20606.1 | SCL28654.1 | GA0074692_0917 | GA0074692_2581 | Methyltransferase domain-containing protein. | Protein of unknown function. | 0.792 |
SCL20606.1 | SCL28660.1 | GA0074692_0917 | GA0074692_2582 | Methyltransferase domain-containing protein. | Helicase conserved C-terminal domain-containing protein. | 0.792 |
SCL20606.1 | SCL28676.1 | GA0074692_0917 | GA0074692_2585 | Methyltransferase domain-containing protein. | SNF2 family N-terminal domain-containing protein. | 0.796 |
SCL20609.1 | SCL20603.1 | GA0074692_0918 | GA0074692_0916 | Helicase conserved C-terminal domain-containing protein; Manually curated. | Helicase conserved C-terminal domain-containing protein. | 0.982 |
SCL20609.1 | SCL20606.1 | GA0074692_0918 | GA0074692_0917 | Helicase conserved C-terminal domain-containing protein; Manually curated. | Methyltransferase domain-containing protein. | 0.950 |
SCL20609.1 | SCL28651.1 | GA0074692_0918 | GA0074692_2580 | Helicase conserved C-terminal domain-containing protein; Manually curated. | PLD-like domain-containing protein. | 0.762 |
SCL20609.1 | SCL28654.1 | GA0074692_0918 | GA0074692_2581 | Helicase conserved C-terminal domain-containing protein; Manually curated. | Protein of unknown function. | 0.787 |
SCL20609.1 | SCL28660.1 | GA0074692_0918 | GA0074692_2582 | Helicase conserved C-terminal domain-containing protein; Manually curated. | Helicase conserved C-terminal domain-containing protein. | 0.925 |
SCL20609.1 | SCL28670.1 | GA0074692_0918 | GA0074692_2584 | Helicase conserved C-terminal domain-containing protein; Manually curated. | Methyltransferase domain-containing protein. | 0.788 |
page 1 of 4