Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL18783.1 | SCL24926.1 | GA0074692_0474 | GA0074692_1864 | PAS domain S-box-containing protein. | AAA ATPase domain-containing protein. | 0.987 |
SCL18783.1 | SCL32326.1 | GA0074692_0474 | GA0074692_3286 | PAS domain S-box-containing protein. | Transcriptional regulatory protein, C terminal. | 0.643 |
SCL18783.1 | SCL33624.1 | GA0074692_0474 | GA0074692_3617 | PAS domain S-box-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.999 |
SCL18783.1 | SCL34724.1 | GA0074692_0474 | GA0074692_3909 | PAS domain S-box-containing protein. | Thioredoxin reductase (NADPH). | 0.999 |
SCL18783.1 | SCL34941.1 | GA0074692_0474 | GA0074692_3963 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SCL18783.1 | SCL37870.1 | GA0074692_0474 | GA0074692_4816 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SCL18783.1 | SCL37873.1 | GA0074692_0474 | GA0074692_4817 | PAS domain S-box-containing protein. | HAMP domain-containing protein. | 0.999 |
SCL18783.1 | SCL39817.1 | GA0074692_0474 | GA0074692_5495 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SCL18783.1 | SCL40517.1 | GA0074692_0474 | GA0074692_5839 | PAS domain S-box-containing protein. | Predicted ATPase. | 0.967 |
SCL24926.1 | SCL18783.1 | GA0074692_1864 | GA0074692_0474 | AAA ATPase domain-containing protein. | PAS domain S-box-containing protein. | 0.987 |
SCL24926.1 | SCL32326.1 | GA0074692_1864 | GA0074692_3286 | AAA ATPase domain-containing protein. | Transcriptional regulatory protein, C terminal. | 0.445 |
SCL24926.1 | SCL33624.1 | GA0074692_1864 | GA0074692_3617 | AAA ATPase domain-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.894 |
SCL24926.1 | SCL34724.1 | GA0074692_1864 | GA0074692_3909 | AAA ATPase domain-containing protein. | Thioredoxin reductase (NADPH). | 0.799 |
SCL24926.1 | SCL34941.1 | GA0074692_1864 | GA0074692_3963 | AAA ATPase domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.823 |
SCL24926.1 | SCL37870.1 | GA0074692_1864 | GA0074692_4816 | AAA ATPase domain-containing protein. | Signal transduction histidine kinase. | 0.986 |
SCL24926.1 | SCL37873.1 | GA0074692_1864 | GA0074692_4817 | AAA ATPase domain-containing protein. | HAMP domain-containing protein. | 0.983 |
SCL24926.1 | SCL39817.1 | GA0074692_1864 | GA0074692_5495 | AAA ATPase domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.814 |
SCL32326.1 | SCL18783.1 | GA0074692_3286 | GA0074692_0474 | Transcriptional regulatory protein, C terminal. | PAS domain S-box-containing protein. | 0.643 |
SCL32326.1 | SCL24926.1 | GA0074692_3286 | GA0074692_1864 | Transcriptional regulatory protein, C terminal. | AAA ATPase domain-containing protein. | 0.445 |
SCL32326.1 | SCL33624.1 | GA0074692_3286 | GA0074692_3617 | Transcriptional regulatory protein, C terminal. | Histidine kinase-like ATPase domain-containing protein. | 0.480 |
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