STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL34759.1Serine/threonine-protein kinase PknG. (754 aa)    
Predicted Functional Partners:
SCL24111.1
FHA domain-containing protein.
  
 
 
 0.999
SCL41498.1
FHA domain-containing protein.
 
 
 
 0.976
SCL34767.1
Hypothetical protein.
  
  
 0.965
SCL34763.1
Hypothetical protein.
 
    0.943
SCL34771.1
Alpha-glucoside transport system substrate-binding protein.
       0.789
SCL34755.1
Hypothetical protein.
  
    0.787
SCL31590.1
Protein phosphatase.
  
 
 0.781
SCL37937.1
Protein phosphatase.
  
 
 0.772
SCL38556.1
Protein phosphatase.
  
 
 0.766
SCL18783.1
PAS domain S-box-containing protein.
   
 0.740
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.