STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL34783.1D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). (530 aa)    
Predicted Functional Partners:
SCL23794.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.829
SCL39963.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
  
  
 
0.789
SCL29462.1
CubicO group peptidase, beta-lactamase class C family.
  
  
 0.645
SCL29457.1
beta-N-acetylhexosaminidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.593
SCL22709.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
     
 0.587
SCL20664.1
CubicO group peptidase, beta-lactamase class C family.
  
  
 0.579
SCL39966.1
Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated.
  
  
 0.545
SCL19535.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.521
SCL20909.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.521
SCL34800.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.521
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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