STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL36648.1ABC-2 type transport system permease protein. (273 aa)    
Predicted Functional Partners:
SCL36652.1
ABC-2 type transport system ATP-binding protein.
 
    0.944
SCL26387.1
ABC-2 type transport system ATP-binding protein.
 
    0.796
SCL36636.1
Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
       0.651
SCL36640.1
Sulfate adenylyltransferase subunit 2.
       0.651
SCL36644.1
3'(2'),5'-bisphosphate nucleotidase.
       0.651
SCL36655.1
Polyhydroxybutyrate depolymerase.
       0.625
SCL36659.1
Hypothetical protein.
 
     0.508
SCL34329.1
Oleandomycin transport system permease protein.
  
  
  0.482
SCL32200.1
Teichoic acid transport system permease protein.
    
  0.452
SCL37290.1
ABC-2 type transport system permease protein.
    
  0.452
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.