Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL18323.1 | SCL38381.1 | GA0074692_0371 | GA0074692_4992 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Hypothetical protein. | 0.484 |
SCL18323.1 | nadD | GA0074692_0371 | GA0074692_6586 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.576 |
SCL18323.1 | nadE | GA0074692_0371 | GA0074692_0237 | Type I phosphodiesterase / nucleotide pyrophosphatase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.559 |
SCL30125.1 | SCL32407.1 | GA0074692_2865 | GA0074692_3307 | Alanine dehydrogenase. | Hypothetical protein. | 0.541 |
SCL30125.1 | SCL38381.1 | GA0074692_2865 | GA0074692_4992 | Alanine dehydrogenase. | Hypothetical protein. | 0.506 |
SCL30125.1 | nadD | GA0074692_2865 | GA0074692_6586 | Alanine dehydrogenase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.558 |
SCL30125.1 | nadE | GA0074692_2865 | GA0074692_0237 | Alanine dehydrogenase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.815 |
SCL30199.1 | SCL38381.1 | GA0074692_2879 | GA0074692_4992 | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | Hypothetical protein. | 0.576 |
SCL32407.1 | SCL30125.1 | GA0074692_3307 | GA0074692_2865 | Hypothetical protein. | Alanine dehydrogenase. | 0.541 |
SCL32407.1 | SCL38245.1 | GA0074692_3307 | GA0074692_4947 | Hypothetical protein. | 8-oxo-dGTP diphosphatase. | 0.481 |
SCL32407.1 | SCL38381.1 | GA0074692_3307 | GA0074692_4992 | Hypothetical protein. | Hypothetical protein. | 0.805 |
SCL32407.1 | SCL38384.1 | GA0074692_3307 | GA0074692_4993 | Hypothetical protein. | SPFH domain / Band 7 family protein. | 0.631 |
SCL32407.1 | SCL38387.1 | GA0074692_3307 | GA0074692_4994 | Hypothetical protein. | 8-oxo-dGTP diphosphatase. | 0.586 |
SCL32407.1 | nadD | GA0074692_3307 | GA0074692_6586 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.608 |
SCL32407.1 | nadE | GA0074692_3307 | GA0074692_0237 | Hypothetical protein. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.872 |
SCL38245.1 | SCL32407.1 | GA0074692_4947 | GA0074692_3307 | 8-oxo-dGTP diphosphatase. | Hypothetical protein. | 0.481 |
SCL38245.1 | SCL38381.1 | GA0074692_4947 | GA0074692_4992 | 8-oxo-dGTP diphosphatase. | Hypothetical protein. | 0.672 |
SCL38245.1 | SCL38384.1 | GA0074692_4947 | GA0074692_4993 | 8-oxo-dGTP diphosphatase. | SPFH domain / Band 7 family protein. | 0.585 |
SCL38245.1 | nadE | GA0074692_4947 | GA0074692_0237 | 8-oxo-dGTP diphosphatase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.574 |
SCL38381.1 | SCL18323.1 | GA0074692_4992 | GA0074692_0371 | Hypothetical protein. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.484 |
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