STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL41873.13-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Belongs to the class-II DAHP synthase family. (408 aa)    
Predicted Functional Partners:
SCL40985.1
Chorismate mutase.
   
 0.999
SCL26541.1
3-dehydroquinate synthase.
 
  
 0.905
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
  
 0.900
SCL41631.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
     
 0.750
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
 0.749
SCL39633.1
3-dehydroquinate synthase.
 
  
 0.711
SCL19118.1
Transketolase; Belongs to the transketolase family.
     
 0.705
SCL30596.1
Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
 
  
 0.539
SCL39131.1
Glycerol-1-phosphate dehydrogenase [NAD(P)+].
     
  0.499
aroA
Ribosome small subunit-dependent GTPase A/3-phosphoshikimate 1-carboxyvinyltransferase,TIGR01356; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
   
 0.490
Your Current Organism:
Micromonospora pallida
NCBI taxonomy Id: 145854
Other names: ATCC 15838, DSM 43817, IFO 16070, JCM 3133, M. pallida, Micromonospora echinospora subsp. pallida, NBRC 16070, NRRL 2996
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