STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL15747.1Cystathionine gamma-synthase. (397 aa)    
Predicted Functional Partners:
SCL27843.1
Cystathionine beta-synthase.
 
 0.980
SCL35964.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.908
SCL28966.1
Cysteine synthase B.
 
 0.901
SCL36279.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.898
SCL13556.1
Cysteine synthase.
 
 0.895
SCL24187.1
Cysteine synthase A; Manually curated.
  
 0.883
SCL16160.1
Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.
  
 0.881
SCL34922.1
Cystathione beta-lyase.
 
 
 0.830
SCL18968.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.812
SCL18674.1
Homoserine dehydrogenase.
  
 
 0.805
Your Current Organism:
Micromonospora nigra
NCBI taxonomy Id: 145857
Other names: ATCC 33088, DSM 43818, IFO 16103, JCM 8973, M. nigra, Micromonospora halophytica subsp. nigra, Micromonospora halophytica var. nigra, NBRC 16103, NCIMB 2225, NRRL 3097
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