STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL22412.1N-Dimethylarginine dimethylaminohydrolase; Manually curated. (277 aa)    
Predicted Functional Partners:
SCL22418.1
Transcriptional regulator, AsnC family.
 
   
 0.756
SCL15870.1
Glutamate synthase (NADH) large subunit.
   
 
  0.736
SCL27427.1
Dihydrolipoamide dehydrogenase.
     
 0.563
SCL22423.1
Secreted protein containing C-terminal beta-propeller domain.
       0.550
arcA
Arginine deiminase.
    
 0.516
SCL18819.1
Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.496
SCL18436.1
Arginase; Belongs to the arginase family.
     
 0.468
SCL23664.1
Valine dehydrogenase (NAD+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
  0.462
SCL33975.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
  0.436
egtB
iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family.
      
 0.410
Your Current Organism:
Micromonospora nigra
NCBI taxonomy Id: 145857
Other names: ATCC 33088, DSM 43818, IFO 16103, JCM 8973, M. nigra, Micromonospora halophytica subsp. nigra, Micromonospora halophytica var. nigra, NBRC 16103, NCIMB 2225, NRRL 3097
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