STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL24336.1LPXTG-motif cell wall anchor domain-containing protein. (401 aa)    
Predicted Functional Partners:
SCL18372.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
  0.624
SCL22215.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
  0.624
SCL29070.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
  0.624
SCL13691.1
Endoglucanase.
   
 
  0.617
menG
Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.452
SCL24330.1
Hypothetical protein.
      
0.450
SCL24347.1
Hypothetical protein.
       0.449
SCL25003.1
Aldose 1-epimerase.
    
  0.446
SCL36264.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 
  0.444
SCL29220.1
WD40 repeat.
    
  0.427
Your Current Organism:
Micromonospora nigra
NCBI taxonomy Id: 145857
Other names: ATCC 33088, DSM 43818, IFO 16103, JCM 8973, M. nigra, Micromonospora halophytica subsp. nigra, Micromonospora halophytica var. nigra, NBRC 16103, NCIMB 2225, NRRL 3097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.