Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL18507.1 | SCL23086.1 | GA0070616_1526 | GA0070616_2663 | FHA domain-containing protein. | FHA domain-containing protein. | 0.559 |
SCL18507.1 | SCL23093.1 | GA0070616_1526 | GA0070616_2664 | FHA domain-containing protein. | FHA domain-containing protein. | 0.765 |
SCL18507.1 | SCL34097.1 | GA0070616_1526 | GA0070616_4881 | FHA domain-containing protein. | Putative peptidoglycan lipid II flippase. | 0.535 |
SCL23086.1 | SCL18507.1 | GA0070616_2663 | GA0070616_1526 | FHA domain-containing protein. | FHA domain-containing protein. | 0.559 |
SCL23086.1 | SCL23093.1 | GA0070616_2663 | GA0070616_2664 | FHA domain-containing protein. | FHA domain-containing protein. | 0.992 |
SCL23086.1 | SCL34097.1 | GA0070616_2663 | GA0070616_4881 | FHA domain-containing protein. | Putative peptidoglycan lipid II flippase. | 0.971 |
SCL23093.1 | SCL18507.1 | GA0070616_2664 | GA0070616_1526 | FHA domain-containing protein. | FHA domain-containing protein. | 0.765 |
SCL23093.1 | SCL23086.1 | GA0070616_2664 | GA0070616_2663 | FHA domain-containing protein. | FHA domain-containing protein. | 0.992 |
SCL23093.1 | SCL34097.1 | GA0070616_2664 | GA0070616_4881 | FHA domain-containing protein. | Putative peptidoglycan lipid II flippase. | 0.535 |
SCL23093.1 | SCL36512.1 | GA0070616_2664 | GA0070616_5507 | FHA domain-containing protein. | FHA domain-containing protein. | 0.764 |
SCL34085.1 | SCL34089.1 | GA0070616_4878 | GA0070616_4879 | Uncharacterized membrane-anchored protein. | Copper transport outer membrane protein, MctB. | 0.994 |
SCL34085.1 | SCL34093.1 | GA0070616_4878 | GA0070616_4880 | Uncharacterized membrane-anchored protein. | Hypothetical protein. | 0.951 |
SCL34085.1 | SCL34097.1 | GA0070616_4878 | GA0070616_4881 | Uncharacterized membrane-anchored protein. | Putative peptidoglycan lipid II flippase. | 0.846 |
SCL34085.1 | SCL34101.1 | GA0070616_4878 | GA0070616_4882 | Uncharacterized membrane-anchored protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.654 |
SCL34085.1 | SCL34105.1 | GA0070616_4878 | GA0070616_4883 | Uncharacterized membrane-anchored protein. | Hypothetical protein. | 0.858 |
SCL34085.1 | SCL36075.1 | GA0070616_4878 | GA0070616_5392 | Uncharacterized membrane-anchored protein. | Protein of unknown function; Manually curated. | 0.794 |
SCL34089.1 | SCL34085.1 | GA0070616_4879 | GA0070616_4878 | Copper transport outer membrane protein, MctB. | Uncharacterized membrane-anchored protein. | 0.994 |
SCL34089.1 | SCL34093.1 | GA0070616_4879 | GA0070616_4880 | Copper transport outer membrane protein, MctB. | Hypothetical protein. | 0.969 |
SCL34089.1 | SCL34097.1 | GA0070616_4879 | GA0070616_4881 | Copper transport outer membrane protein, MctB. | Putative peptidoglycan lipid II flippase. | 0.897 |
SCL34089.1 | SCL34101.1 | GA0070616_4879 | GA0070616_4882 | Copper transport outer membrane protein, MctB. | Glycosyltransferase involved in cell wall bisynthesis. | 0.713 |
page 1 of 3