Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KON85451.1 | KON85452.1 | AF332_00225 | AF332_00230 | Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
KON85452.1 | KON85451.1 | AF332_00230 | AF332_00225 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
KON85452.1 | KON89845.1 | AF332_00230 | AF332_25530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | 0.518 |
KON85452.1 | bshC | AF332_00230 | AF332_21910 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH. | 0.529 |
KON85452.1 | cysS | AF332_00230 | AF332_02665 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.534 |
KON89845.1 | KON85452.1 | AF332_25530 | AF332_00230 | Ribonuclease; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
bshC | KON85452.1 | AF332_21910 | AF332_00230 | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.529 |
cysS | KON85452.1 | AF332_02665 | AF332_00230 | cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.534 |