Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KON85556.1Macrolide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
KON89891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
KON85528.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
KON85455.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
KON89287.1
Macrolide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
tdk
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.567
KON85555.1
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
     
  0.538
KON86180.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.502
KON90079.1
Cytochrome C biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
KON87480.1
Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.463
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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