Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
KON86192.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (491 aa)    
Predicted Functional Partners:
KON86198.1
Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
KON86199.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.945
KON86195.1
3-methylaspartate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.932
KON90451.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.924
KON89562.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 0.900
KON86194.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
KON86200.1
Crystallin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.879
KON90060.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.875
KON90196.1
Crystallin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.872
KON86193.1
Crystallin J1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.871
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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