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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KON86729.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (622 aa)    
Predicted Functional Partners:
KON89289.1
Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.970
KON86020.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.961
KON87670.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
KON87655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.933
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.932
KON85920.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
KON86457.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.929
KON87651.1
Nitrate/nitrite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.911
KON89597.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.911
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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