Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KON87554.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
KON88106.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.813
KON90339.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.692
KON88288.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.558
KON87556.1
Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.549
KON87555.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
KON87318.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.494
KON88754.1
Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.492
KON87700.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.467
KON85989.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.455
KON87790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.449
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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