STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KON87677.1Glycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)    
Predicted Functional Partners:
KON87678.1
Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
KON87676.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
KON87932.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.935
KON90433.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.935
KON89337.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
lutB
Amino acid dehydrogenase; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate.
 
 0.884
KON90427.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.860
KON89013.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.826
lutC
Lactate utilization protein C; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
 
 
 0.815
KON88845.1
2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.794
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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